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  5. Dcu_g50147

Dcu_g50147


Description : not classified & original description: none


Gene families : OG0007012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g50147
Cluster HCCA: Cluster_163


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 140 186
IPR002885 Pentatricopeptide_repeat 725 772
IPR002885 Pentatricopeptide_repeat 491 537
IPR002885 Pentatricopeptide_repeat 607 654
IPR002885 Pentatricopeptide_repeat 825 872
IPR002885 Pentatricopeptide_repeat 256 303
IPR002885 Pentatricopeptide_repeat 582 606
IPR002885 Pentatricopeptide_repeat 800 822
IPR002885 Pentatricopeptide_repeat 465 487
IPR002885 Pentatricopeptide_repeat 900 924
IPR002885 Pentatricopeptide_repeat 698 722
IPR002885 Pentatricopeptide_repeat 333 386
No external refs found!