Dcu_g48863 (CRR2)


Aliases : CRR2

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48863

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00030580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Adi_g003282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17503 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07268 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05931 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38958.t1 Aspi01Gene38958 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71026.t1 Aspi01Gene71026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011663 No alias not classified & original description: CDS=1-3036 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026450 No alias not classified & original description: CDS=1-3138 0.06 OrthoFinder output from all 47 species
Azfi_s0094.g043395 No alias not classified & original description: CDS=1-2703 0.02 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.02 OrthoFinder output from all 47 species
Azfi_s0380.g067373 No alias not classified & original description: CDS=1-3669 0.02 OrthoFinder output from all 47 species
Cba_g03394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.04 OrthoFinder output from all 47 species
Cre01.g025950 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g29961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
LOC_Os01g74600.1 CRR22, LOC_Os01g74600 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.07 OrthoFinder output from all 47 species
LOC_Os04g35610.1 LOC_Os04g35610 RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
LOC_Os09g34870.1 LOC_Os09g34870 Pentatricopeptide repeat-containing protein At2g36980,... 0.07 OrthoFinder output from all 47 species
Len_g05143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g24617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03628 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013529 No alias ssDNA-binding protein *(OSB) & original description: CDS=539-3667 0.04 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.06 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016542_P001 Zm00001e016542 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 402 448
IPR002885 Pentatricopeptide_repeat 504 550
IPR002885 Pentatricopeptide_repeat 578 600
IPR002885 Pentatricopeptide_repeat 304 334
IPR002885 Pentatricopeptide_repeat 377 400
IPR046848 E_motif 621 678
No external refs found!