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  5. Dcu_g48346

Dcu_g48346


Description : not classified & original description: none


Gene families : OG0004954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48346
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00137820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g68789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G016100.1 Ceric.04G016100 not classified & original description: pacid=50630510... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021135.25 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre16.g677800 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01010628001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os08g43230.1 LOC_Os08g43230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo437453 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g026260.3.1 Solyc03g026260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g09582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003750_P001 Zm00001e003750 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002816 TraB/PrgY/GumN_fam 150 381
No external refs found!