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  5. Dcu_g45973

Dcu_g45973 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45973

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266920 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00143340 ERF1, ATERF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00096190 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 OrthoFinder output from all 47 species
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.04 OrthoFinder output from all 47 species
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G50080 ERF110 ethylene response factor 110 0.02 OrthoFinder output from all 47 species
Aev_g25772 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g11206 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g48568 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07767 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g36216 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05372.t1 DEAR3, Aspi01Gene05372 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24331.t1 Aspi01Gene24331 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24332.t1 Aspi01Gene24332 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49729.t1 HRE2, Aspi01Gene49729 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49730.t1 HRE2, Aspi01Gene49730 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52705.t1 DREB26, Aspi01Gene52705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56619.t1 RAP2.1, Aspi01Gene56619 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0107.g045128 ORA47 not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Ceric.11G060100.1 HRE1, Ceric.11G060100 subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cre08.g364400 RAP2.2 No description available 0.01 OrthoFinder output from all 47 species
Dac_g15037 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001089001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Gb_26096 HRE2 Ethylene-responsive transcription factor RAP2-3... 0.03 OrthoFinder output from all 47 species
LOC_Os03g09170.1 RAP2.4, LOC_Os03g09170 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g09810.1 LOC_Os06g09810 Ethylene-responsive transcription factor ERF017... 0.04 OrthoFinder output from all 47 species
Lfl_g30898 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.06 OrthoFinder output from all 47 species
MA_10432141g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_12671g0020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_15251g0010 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_442451g0010 ERF1, ATERF1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_66742g0010 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Mp7g13760.1 RAP2.4 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g07523 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g43178 RAP2.9, DEAR5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11442 No alias subgroup ERF-V transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11606 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Nbi_g21523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38654 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26932 ATERF13, ERF13, EREBP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g31214 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g05242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_13260V3.1 Pp3c16_13260 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_810V3.1 Pp3c5_810 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_820V3.1 Pp3c5_820 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012659 No alias not classified & original description: CDS=1-1455 0.02 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
Solyc02g067020.1.1 RAP2.11, Solyc02g067020 transcription factor (ERF). transcription factor (ERN1) 0.05 OrthoFinder output from all 47 species
Solyc04g050750.2.1 Solyc04g050750 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Tin_g13240 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Tin_g26947 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Zm00001e015219_P001 Zm00001e015219 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e041288_P001 Zm00001e041288 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 147 195
No external refs found!