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  5. Dcu_g45799

Dcu_g45799


Description : not classified & original description: none


Gene families : OG0007012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45799
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Dcu_g08970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26826 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47934 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 462 484
IPR002885 Pentatricopeptide_repeat 490 520
IPR002885 Pentatricopeptide_repeat 680 700
IPR002885 Pentatricopeptide_repeat 345 369
IPR002885 Pentatricopeptide_repeat 773 804
IPR002885 Pentatricopeptide_repeat 604 651
IPR002885 Pentatricopeptide_repeat 370 417
IPR002885 Pentatricopeptide_repeat 137 184
IPR002885 Pentatricopeptide_repeat 706 752
No external refs found!