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  5. Dcu_g45185

Dcu_g45185 (ARLIM15, DMC1, ATDMC1)


Aliases : ARLIM15, DMC1, ATDMC1

Description : recombinase *(DMC1) & original description: none


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45185
Cluster HCCA: Cluster_492

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270090 ARLIM15, DMC1,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043383 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.01 OrthoFinder output from all 47 species
GSVIVT01018051001 ARLIM15, DMC1, ATDMC1 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.05 OrthoFinder output from all 47 species
Nbi_g27247 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g45230 RAD51, ATRAD51 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02824 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo408953 RAD51, ATRAD51 DNA repair protein RAD51 homolog OS=Solanum lycopersicum 0.01 OrthoFinder output from all 47 species
Spa_g49520 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020831_P002 ARLIM15, DMC1,... recombinase (DMC1) 0.02 OrthoFinder output from all 47 species
Zm00001e035339_P001 RAD51, ATRAD51,... component RAD51 of BRCC DNA-damage response complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 88 338
No external refs found!