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  5. Dcu_g45067

Dcu_g45067 (NFC04, MSI4, NFC4,...)


Aliases : NFC04, MSI4, NFC4, ACG1, FVE, ATMSI4

Description : flowering time factor *(FVE) & original description: none


Gene families : OG0004797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45067
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.75 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 10 76
IPR001680 WD40_repeat 322 359
IPR001680 WD40_repeat 230 265
IPR001680 WD40_repeat 276 310
IPR001680 WD40_repeat 156 192
No external refs found!