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  5. Dcu_g44587

Dcu_g44587 (CYP59, ATCYP59)


Aliases : CYP59, ATCYP59

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0004464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g44587

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00149770 CYP59, ATCYP59,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Aev_g06707 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G061200.1 CYP59, ATCYP59,... EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Len_g07412 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08219 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g22800.1 CYP59, ATCYP59 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Pir_g12946 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53561 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g066420.4.1 CYP59, ATCYP59,... protein folding catalyst 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 84 241
IPR001878 Znf_CCHC 433 449
IPR000504 RRM_dom 325 395
No external refs found!