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  5. Dcu_g42996

Dcu_g42996


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42996
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.03 OrthoFinder output from all 47 species
Adi_g041861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.05 OrthoFinder output from all 47 species
Azfi_s0217.g058560 No alias not classified & original description: CDS=1-231 0.02 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.11 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
LOC_Os03g02040.1 LOC_Os03g02040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g01012 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g57393 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06649 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g43674 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g43675 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g45215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.03 OrthoFinder output from all 47 species
Sam_g06763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo92364 No alias Remorin OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 93 195
No external refs found!