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  5. Dcu_g42964

Dcu_g42964 (FMA)


Aliases : FMA

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42964
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00081740 MUTE,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Adi_g013122 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25773 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10378 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29143.t1 FMA, Aspi01Gene29143 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60126.t1 FMA, Aspi01Gene60126 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17824 FMA bHLH-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01021074001 FMA RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_17233 FMA transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_686524g0010 FMA transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Nbi_g10985 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11060 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18808 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63346 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080050.4.1 MUTE, Solyc01g080050 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc03g007410.4.1 SPCH, Solyc03g007410 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc05g053660.3.1 FMA, Solyc05g053660 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc09g091760.3.1 FMA, Solyc09g091760 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g17260 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47856 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000161_P002 Zm00001e000161 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 273 324
No external refs found!