Dcu_g39663

Description : not classified & original description: none

Gene families : OG0007457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007457_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g39663
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
Ala_g18897	No alias	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Ceric.02G052600.1	Ceric.02G052600	not classified & original description: pacid=50584533...	0.03	OrthoFinder output from all 47 species
Cre07.g314600	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.02	OrthoFinder output from all 47 species
Dac_g16513	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g12449	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ehy_g22969	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01037941001	No alias	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.06	OrthoFinder output from all 47 species
LOC_Os03g56869.1	LOC_Os03g56869	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.06	OrthoFinder output from all 47 species
Nbi_g09273	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Solyc02g069620.4.1	Solyc02g069620	Probable ribose-5-phosphate isomerase 4, chloroplastic...	0.07	OrthoFinder output from all 47 species
Spa_g15641	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12912	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016860	intramolecular oxidoreductase activity	None	Extended
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071586	CAAX-box protein processing	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004788	Ribose5P_isomerase_type_A	65	240

External Links

No external refs found!