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  5. Dcu_g39476

Dcu_g39476


Description : GTPase effector *(BDR) & original description: none


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39476

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00180180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G79420 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
AT5G06610 No alias Protein of unknown function (DUF620) 0.06 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37858 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10609 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15973 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02181 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21827 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09619 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14931 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01037884001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_21083 No alias GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
MA_133920g0010 No alias GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
MA_21627g0010 No alias GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
Pir_g06945 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11658 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11659 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g085490.2.1 Solyc02g085490 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Spa_g41215 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55614 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 180 419
No external refs found!