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  5. Dcu_g39238

Dcu_g39238 (CPSRP43, CAO)


Aliases : CPSRP43, CAO

Description : component *(cpSRP43) of thylakoid membrane SRP insertion system & original description: none


Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39238

Target Alias Description ECC score Gene Family Method Actions
AT2G47450 CPSRP43, CAO chloroplast signal recognition particle component (CAO) 0.03 OrthoFinder output from all 47 species
Adi_g113205 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Aev_g05408 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Ceric.38G054000.1 CPSRP43, CAO,... component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Cre04.g231026 CPSRP43, CAO Protein translocation.chloroplast.thylakoid membrane SRP... 0.05 OrthoFinder output from all 47 species
Dac_g13150 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03990.1 CPSRP43, CAO,... component cpSRP43 of thylakoid membrane SRP insertion system 0.07 OrthoFinder output from all 47 species
Len_g16711 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
MA_845170g0010 No alias component cpSRP43 of thylakoid membrane SRP insertion system 0.03 OrthoFinder output from all 47 species
Mp2g09760.1 CPSRP43, CAO component cpSRP43 of thylakoid membrane SRP insertion system 0.04 OrthoFinder output from all 47 species
Msp_g12207 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Ore_g41563 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Smo270723 CPSRP43, CAO Protein translocation.chloroplast.thylakoid membrane SRP... 0.06 OrthoFinder output from all 47 species
Spa_g13003 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Tin_g03919 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 226 309
IPR023780 Chromo_domain 356 399
IPR023780 Chromo_domain 407 449
No external refs found!