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  5. Dcu_g38589

Dcu_g38589


Description : not classified & original description: none


Gene families : OG0003174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38589

Target Alias Description ECC score Gene Family Method Actions
Adi_g060011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12718 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10427843g0020 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp1g03400.1 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g10080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01595 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010397_P003 Zm00001e010397 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e021906_P002 Zm00001e021906 RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 52 82
IPR001876 Znf_RanBP2 218 248
IPR001876 Znf_RanBP2 268 298
No external refs found!