Dcu_g37645 (Psb27-H1, LPA19)

Aliases : Psb27-H1, LPA19

Description : not classified & original description: none

Gene families : OG0004638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004638_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g37645

Target	Alias	Description	ECC score	Gene Family Method
Aob_g13113	Psb27-H1, LPA19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cre02.g073850	No alias	No description available	0.03	OrthoFinder output from all 47 species
Dac_g33397	Psb27-H1, LPA19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g47626	Psb27-H1, LPA19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g53640.1	Psb27-H1, LPA19,...	Photosystem II D1 precursor processing protein PSB27-H2,...	0.05	OrthoFinder output from all 47 species
Ore_g30336	Psb27-H1, LPA19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026101	Psb27-H1, LPA19	not classified & original description: CDS=109-834	0.04	OrthoFinder output from all 47 species
Solyc09g076030.4.1	Psb27-H1, LPA19,...	Photosystem II D1 precursor processing protein PSB27-H2,...	0.04	OrthoFinder output from all 47 species
Spa_g30155	Psb27-H1, LPA19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51028	Psb27-H1, LPA19	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010206	photosystem II repair	IEA	Interproscan
BP	GO:0010207	photosystem II assembly	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030091	protein repair	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025585	PSII_Pbs27	125	252

External Links

No external refs found!