Dcu_g36527 (ATCNGC20, CNGC20, CNBT1)

Aliases : ATCNGC20, CNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g36527

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00268510	ATCNGC17,...	Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00210p00019190	CNGC5, ATCNGC5,...	Solute transport.channels.VIC superfamily.cyclic...	0.03	OrthoFinder output from all 47 species
Als_g15919	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
LOC_Os03g44440.1	ATCNGC9, CNGC9,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
LOC_Os04g55080.1	ATCNGC6, CNGC6,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
LOC_Os06g08850.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
LOC_Os09g38580.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Lfl_g40461	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
MA_10437079g0010	CNGC5, ATCNGC5	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
MA_25248g0010	CNGC5, ATCNGC5	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Nbi_g30846	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g18538	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Sam_g39902	No alias	cyclic nucleotide-gated cation channel *(CNGC) &...	0.07	OrthoFinder output from all 47 species
Smo113786	ATCNGC9, CNGC9	Solute transport.channels.VIC superfamily.cyclic...	0.03	OrthoFinder output from all 47 species
Solyc07g005590.3.1	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
Solyc12g010010.2.1	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Zm00001e016088_P002	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
Zm00001e034885_P002	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	140	464

External Links

No external refs found!

Dcu_g36527 (ATCNGC20, CNGC20, CNBT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation