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  5. Dcu_g35677

Dcu_g35677


Description : not classified & original description: none


Gene families : OG0001883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35677
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT2G32150 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G59490 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.02 OrthoFinder output from all 47 species
Nbi_g13046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001210 No alias not classified & original description: CDS=1-729 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021470 No alias not classified & original description: CDS=252-1109 0.03 OrthoFinder output from all 47 species
Solyc01g068630.3.1 Solyc01g068630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g41025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041492 HAD_2 51 240
No external refs found!