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Dcu_g35482


Description : nucleoporin of nuclear pore complex *(NUP58) & original description: none


Gene families : OG0006938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35482

Target Alias Description ECC score Gene Family Method Actions
Als_g03742 No alias nucleoporin of nuclear pore complex *(NUP58) & original... 0.03 OrthoFinder output from all 47 species
Cre16.g685217 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28019.1 LOC_Os09g28019 NUP58 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Ore_g16792 No alias nucleoporin of nuclear pore complex *(NUP58) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010572 No alias nucleoporin of nuclear pore complex *(NUP58) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR006594 LisH 10 36
No external refs found!