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  5. Aev_g28179

Aev_g28179 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g28179

Target Alias Description ECC score Gene Family Method Actions
Adi_g101030 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41855.t1 GLR3.3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64317.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65141.t1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g17403 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g44663 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12728 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 270 560
IPR001828 ANF_lig-bd_rcpt 3 188
IPR001320 Iontro_rcpt_C 369 474
No external refs found!