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  5. Dcu_g33064

Dcu_g33064


Description : circadian clock factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g33064
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT4G01280 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g07955 RVE1 transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035858 RVE1 transcription factor *(REVEILLE) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.09G067300.1 Ceric.09G067300 transcription factor *(REVEILLE) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z302400.1 Ceric.1Z302400 transcription factor *(REVEILLE) & original description:... 0.07 OrthoFinder output from all 47 species
Len_g20787 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18757 No alias transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29515 No alias circadian clock factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013571 RVE1 transcription factor *(REVEILLE) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014166 RVE2, CIR1 transcription factor *(REVEILLE) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g12578 No alias transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49740 No alias transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21846 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38631 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 40 85
No external refs found!