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  5. Aev_g27957

Aev_g27957 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g27957

Target Alias Description ECC score Gene Family Method Actions
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Aob_g03211 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426784g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_199593g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_951010g0010 OPCL1 4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g076300.3.1 Solyc08g076300 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g21116 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 50 455
IPR025110 AMP-bd_C 464 539
No external refs found!