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  5. Dcu_g31006

Dcu_g31006 (PSBX)


Aliases : PSBX

Description : component *(PsbX) of PS-II complex & original description: none


Gene families : OG0002177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g31006
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.26 OrthoFinder output from all 47 species
AT2G06520 PSBX photosystem II subunit X 0.23 OrthoFinder output from all 47 species
Adi_g021165 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024522 PSBX component *(PsbX) of PS-II complex & original description: none 0.23 OrthoFinder output from all 47 species
Adi_g024523 PSBX component *(PsbX) of PS-II complex & original description: none 0.23 OrthoFinder output from all 47 species
Adi_g048424 PSBX component *(PsbX) of PS-II complex & original description: none 0.23 OrthoFinder output from all 47 species
Aev_g41627 PSBX component *(PsbX) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Ala_g10239 PSBX component *(PsbX) of PS-II complex & original description: none 0.29 OrthoFinder output from all 47 species
Ala_g27184 PSBX component *(PsbX) of PS-II complex & original description: none 0.28 OrthoFinder output from all 47 species
Als_g48977 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55668 No alias component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Als_g55991 PSBX component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g14986 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07528 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene08999.t1 PSBX, Aspi01Gene08999 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58924.t1 PSBX, Aspi01Gene58924 component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59149.t1 PSBX, Aspi01Gene59149 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023498 PSBX component *(PsbX) of PS-II complex & original... 0.1 OrthoFinder output from all 47 species
Azfi_s0245.g060001 No alias component *(PsbX) of PS-II complex & original... 0.07 OrthoFinder output from all 47 species
Cba_g05544 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22045 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G046600.1 PSBX, Ceric.04G046600 component *(PsbX) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G082200.1 PSBX, Ceric.04G082200 component *(PsbX) of PS-II complex & original... 0.31 OrthoFinder output from all 47 species
Ceric.24G060900.1 PSBX, Ceric.24G060900 component *(PsbX) of PS-II complex & original... 0.24 OrthoFinder output from all 47 species
Dac_g02996 PSBX component *(PsbX) of PS-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Dac_g14007 PSBX component *(PsbX) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g17182 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g21257 PSBX component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g21199 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g22238 PSBX component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g23441 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01035449001 PSBX Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.19 OrthoFinder output from all 47 species
Gb_07296 PSBX component PsbX of PS-II complex 0.14 OrthoFinder output from all 47 species
Gb_14525 PSBX component PsbX of PS-II complex 0.07 OrthoFinder output from all 47 species
LOC_Os03g22370.1 PSBX, LOC_Os03g22370 component PsbX of PS-II complex 0.13 OrthoFinder output from all 47 species
LOC_Os07g47640.1 PSBX, LOC_Os07g47640 component PsbX of PS-II complex 0.13 OrthoFinder output from all 47 species
Len_g13373 PSBX component *(PsbX) of PS-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Len_g19235 No alias component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g10431 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g15877 No alias component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g17843 No alias component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
MA_464043g0010 PSBX component PsbX of PS-II complex 0.09 OrthoFinder output from all 47 species
MA_59693g0010 PSBX component PsbX of PS-II complex 0.02 OrthoFinder output from all 47 species
Mp6g21460.1 PSBX component PsbX of PS-II complex 0.21 OrthoFinder output from all 47 species
Ore_g25684 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Pir_g09968 PSBX component *(PsbX) of PS-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Pir_g48365 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06188 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30737 No alias component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c1_32200V3.1 PSBX, Pp3c1_32200 photosystem II subunit X 0.07 OrthoFinder output from all 47 species
Pp3c5_17290V3.1 PSBX, Pp3c5_17290 photosystem II subunit X 0.12 OrthoFinder output from all 47 species
Ppi_g04809 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g20878 No alias component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g24668 No alias component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002436 PSBX component *(PsbX) of PS-II complex & original... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023606 PSBX component *(PsbX) of PS-II complex & original... 0.1 OrthoFinder output from all 47 species
Sam_g04554 No alias component *(PsbX) of PS-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Sam_g28404 No alias component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g025600.1.1 PSBX, Solyc05g025600 component PsbX of PS-II complex 0.22 OrthoFinder output from all 47 species
Solyc12g150101.1.1 PSBX, Solyc12g150101 component PsbX of PS-II complex 0.14 OrthoFinder output from all 47 species
Spa_g02683 PSBX component *(PsbX) of PS-II complex & original description: none 0.15 OrthoFinder output from all 47 species
Spa_g29201 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g35692 PSBX component *(PsbX) of PS-II complex & original description: none 0.26 OrthoFinder output from all 47 species
Tin_g00078 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07238 PSBX component *(PsbX) of PS-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g16593 PSBX component *(PsbX) of PS-II complex & original description: none 0.19 OrthoFinder output from all 47 species
Zm00001e025856_P001 PSBX, Zm00001e025856 component PsbX of PS-II complex 0.26 OrthoFinder output from all 47 species
Zm00001e035834_P001 PSBX, Zm00001e035834 component PsbX of PS-II complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008800 beta-lactamase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP HCCA
BP GO:0016999 antibiotic metabolic process IEP HCCA
BP GO:0017001 antibiotic catabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030653 beta-lactam antibiotic metabolic process IEP HCCA
BP GO:0030655 beta-lactam antibiotic catabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072338 lactam metabolic process IEP HCCA
BP GO:0072340 lactam catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 101 137
No external refs found!