1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g30378

Dcu_g30378 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g30378
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00168710 WLIM1,... RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT1G10200 WLIM1 GATA type zinc finger transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT2G39900 No alias GATA type zinc finger transcription factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g077331 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11262 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05610 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37425 No alias LIM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g27988 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007812001 WLIM1 RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
GSVIVT01019807001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42820.1 LOC_Os02g42820 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45010.1 LOC_Os04g45010 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
LOC_Os12g32620.1 WLIM1, LOC_Os12g32620 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Lfl_g05819 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16712 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58816 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14059 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114000.3.1 WLIM1, Solyc03g114000 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Solyc06g071310.4.1 WLIM1, Solyc06g071310 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species
Tin_g04312 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e029431_P002 WLIM1, Zm00001e029431 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 10 64
IPR001781 Znf_LIM 112 167
No external refs found!