Aliases : HIS1-3
Description : linker histone *(H1) & original description: none
Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00264270 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H1 linker histone | 0.05 | OrthoFinder output from all 47 species | |
Ala_g04837 | HIS1-3 | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g25617 | No alias | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g04785 | HIS1-3 | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g36246 | No alias | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01000755001 | No alias | Chromatin organisation.histones.H1 linker histone | 0.04 | OrthoFinder output from all 47 species | |
Len_g20176 | HIS1-3 | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g59703 | HIS1-3 | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g04542 | No alias | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 95 | 161 |
No external refs found! |