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  5. Dcu_g28663

Dcu_g28663 (EMB2001)


Aliases : EMB2001

Description : not classified & original description: none


Gene families : OG0001817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g28663

Target Alias Description ECC score Gene Family Method Actions
AT2G22870 EMB2001 P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g043228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12731 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03254 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08260 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02056 EMB2001 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.32G033500.1 Ceric.32G033500 not classified & original description: pacid=50598717... 0.04 OrthoFinder output from all 47 species
Cre12.g524950 EMB2001 GTP-binding protein At2g22870 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g09689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20375 No alias GTP-binding protein At2g22870 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g53150.2 LOC_Os01g53150 GTP-binding protein At2g22870 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g32308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04362 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09757 EMB2001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12127 EMB2001 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e038655_P001 EMB2001, Zm00001e038655 GTP-binding protein At2g22870 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 130 247
No external refs found!