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Description : not classified & original description: none
Gene families : OG0003216 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003216_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g24307 | |
| Cluster | HCCA: Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00263690 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g34610 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g02688 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g27679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g19198 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g08147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0075.g037680 | No alias | not classified & original description: CDS=1-3324 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g33328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.17G007300.1 | Ceric.17G007300 | not classified & original description: pacid=50618751... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g19121 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_11517 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_37342 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427774g0030 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427774g0040 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_10436867g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp7g02740.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25790 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10952 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g12636 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0045.g013169 | No alias | not classified & original description: CDS=594-4430 | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25905 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g13370 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g17157 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |