Dcu_g24054 (ftsh9)

Aliases : ftsh9

Description : component *(FtsH7/9) of FtsH plastidial protease complexes & original description: none

Gene families : OG0003686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003686_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g24054
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00219050	ftsh9,...	Protein degradation.peptidase families.metallopeptidase...	0.05	OrthoFinder output from all 47 species
AT5G58870	ftsh9	FTSH protease 9	0.02	OrthoFinder output from all 47 species
Adi_g112827	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Als_g10828	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Cba_g03385	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Dde_g27982	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Gb_07582	ftsh9	component FtsH7\|9 of FtsH plastidial protease complexes	0.09	OrthoFinder output from all 47 species
LOC_Os02g43350.1	ftsh7, LOC_Os02g43350	component FtsH7\|9 of FtsH plastidial protease complexes	0.03	OrthoFinder output from all 47 species
Len_g01388	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Nbi_g07114	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Ore_g36194	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Pir_g20457	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Ppi_g56490	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0277.g027072	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Sam_g36797	No alias	component *(FtsH7/9) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Smo167789	ftsh9	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Solyc06g005950.3.1	ftsh9, Solyc06g005950	component FtsH7\|9 of FtsH plastidial protease complexes	0.02	OrthoFinder output from all 47 species
Zm00001e023134_P002	ftsh9, Zm00001e023134	component FtsH7\|9 of FtsH plastidial protease complexes	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006537	glutamate biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	476	518
IPR000642	Peptidase_M41	537	728
IPR003959	ATPase_AAA_core	318	451

External Links

No external refs found!

Dcu_g24054 (ftsh9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation