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  5. Dcu_g23595

Dcu_g23595


Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: none


Gene families : OG0004276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g23595
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00114590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G08020 No alias PHD finger family protein 0.04 OrthoFinder output from all 47 species
AT3G52100 No alias RING/FYVE/PHD-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g021931 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Adi_g074704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11408 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Ceric.02G090500.1 Ceric.02G090500 SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Ehy_g19588 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
GSVIVT01032130001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os12g34330.1 LOC_Os12g34330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20530 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Lfl_g17382 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
MA_76768g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g07738 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g13973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13974 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Solyc01g087430.3.1 Solyc01g087430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018296_P003 Zm00001e018296 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 208 251
No external refs found!