Dcu_g20390

Description : not classified & original description: none

Gene families : OG0005975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005975_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g20390
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
Adi_g018031	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g09706	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010294001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Pp3c24_16920V3.1	Pp3c24_16920	CAAX amino terminal protease family protein	0.01	OrthoFinder output from all 47 species
Sam_g52504	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g24308	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e039341_P002	Zm00001e039341	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071586	CAAX-box protein processing	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	HCCA
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003675	Rce1-like	233	317

External Links

No external refs found!