Description : not classified & original description: none
Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g20118 | |
Cluster | HCCA: Cluster_184 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00270600 | evm_27.TU.AmTr_v1... | 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.02 | OrthoFinder output from all 47 species | |
AT5G09880 | No alias | Splicing factor, CC1-like | 0.03 | OrthoFinder output from all 47 species | |
Adi_g075755 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g103931 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06965 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g21138 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Als_g21139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g28379 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aob_g32208 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene07014.t2 | Aspi01Gene07014 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10413 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.27G027600.1 | Ceric.27G027600 | not classified & original description: pacid=50605291... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.33G026000.1 | Ceric.33G026000 | not classified & original description: pacid=50607594... | 0.04 | OrthoFinder output from all 47 species | |
Cre04.g213905 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dde_g09952 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023998001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Gb_11513 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Gb_39308 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os03g05830.1 | LOC_Os03g05830 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g30370.1 | LOC_Os10g30370 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Len_g18833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g58331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g02031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g34973 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Mp7g19710.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07209 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g11719 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g15339 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g60972 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g25040 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g13992 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sam_g39366 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g005170.2.1 | Solyc11g005170 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g10142 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g19702 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g29001 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e004710_P005 | Zm00001e004710 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e012773_P005 | Zm00001e012773 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e038994_P002 | Zm00001e038994 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000012 | single strand break repair | IEP | HCCA |
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |