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  5. Dcu_g19389

Dcu_g19389


Description : not classified & original description: none


Gene families : OG0001760 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g19389
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269010 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g010461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30617 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07932 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g06044 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g10526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_5303g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022481 No alias not classified & original description: CDS=18-2219 0.02 OrthoFinder output from all 47 species
Sam_g14911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37301 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!