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  5. Dcu_g18998

Dcu_g18998


Description : not classified & original description: none


Gene families : OG0004380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g18998
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248170 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AMTR_s00029p00231350 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AT3G23740 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT3G56870 No alias unknown protein; Has 204 Blast hits to 201 proteins in... 0.02 OrthoFinder output from all 47 species
Ala_g07413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g010787 No alias not classified & original description: CDS=18-2243 0.07 OrthoFinder output from all 47 species
Ceric.07G010200.1 Ceric.07G010200 not classified & original description: pacid=50627972... 0.09 OrthoFinder output from all 47 species
GSVIVT01009690001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01031579001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_19139 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Gb_25851 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g16322 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_124485g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_45158g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g04690.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Msp_g27079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019231 No alias not classified & original description: CDS=15-2900 0.04 OrthoFinder output from all 47 species
Solyc04g080200.4.1 Solyc04g080200 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc09g092510.3.1 Solyc09g092510 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e002120_P003 Zm00001e002120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017187_P001 Zm00001e017187 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e025613_P002 Zm00001e025613 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!