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  5. Dcu_g17620

Dcu_g17620


Description : assembly factor PSA3 involved in PS-I assembly & original description: none


Gene families : OG0007623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17620

Target Alias Description ECC score Gene Family Method Actions
AT3G55250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Als_g10063 No alias assembly factor PSA3 involved in PS-I assembly &... 0.04 OrthoFinder output from all 47 species
Aob_g05734 No alias assembly factor PSA3 involved in PS-I assembly &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63294.t1 Aspi01Gene63294 assembly factor PSA3 involved in PS-I assembly &... 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034565 No alias assembly factor PSA3 involved in PS-I assembly &... 0.04 OrthoFinder output from all 47 species
Ceric.01G110900.1 Ceric.01G110900 assembly factor PSA3 involved in PS-I assembly &... 0.05 OrthoFinder output from all 47 species
Cre03.g183400 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g22999 No alias assembly factor PSA3 involved in PS-I assembly &... 0.03 OrthoFinder output from all 47 species
Dde_g24890 No alias assembly factor PSA3 involved in PS-I assembly &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032484001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
LOC_Os05g45030.1 LOC_Os05g45030 assembly factor PSA3 involved in PS-I assembly 0.02 OrthoFinder output from all 47 species
Solyc02g086890.3.1 Solyc02g086890 assembly factor PSA3 involved in PS-I assembly 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!