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  5. Dcu_g16932

Dcu_g16932


Description : CWF19-type post-transcriptionally regulatory factor & original description: none


Gene families : OG0003680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003680_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g16932
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cba_g05932 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ceric.26G021200.1 Ceric.26G021200 CWF19-type post-transcriptionally regulatory factor &... 0.05 OrthoFinder output from all 47 species
Cre17.g741550 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01018130001 No alias Zinc finger CCCH domain-containing protein 59 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Len_g03384 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Lfl_g02046 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Mp4g02790.1 No alias Zinc finger CCCH domain-containing protein 64... 0.03 OrthoFinder output from all 47 species
Pir_g00631 No alias CWF19-type post-transcriptionally regulatory factor &... 0.05 OrthoFinder output from all 47 species
Solyc09g083420.3.1 Solyc09g083420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005620_P001 Zm00001e005620 Zinc finger CCCH domain-containing protein 59 OS=Oryza... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006768 Cwf19-like_C_dom-1 554 678
IPR006767 Cwf19-like_C_dom-2 687 784
No external refs found!