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Description : rRNA processing factor *(IRP1) & original description: none
Gene families : OG0002038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002038_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g14850 | |
| Cluster | HCCA: Cluster_195 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ehy_g06475 | No alias | rRNA processing factor *(IRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g41480.1 | LOC_Os08g41480 | rRNA processing factor (IRP1) | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06601 | No alias | rRNA processing factor *(IRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12687 | No alias | rRNA processing factor *(IRP1) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
| MF | GO:0004619 | phosphoglycerate mutase activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0046537 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001660 | SAM | 223 | 276 |
| No external refs found! |