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  5. Dcu_g14564

Dcu_g14564


Description : not classified & original description: none


Gene families : OG0008372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14564

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.03 OrthoFinder output from all 47 species
Aev_g07249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01113 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g02239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61177.t1 Aspi01Gene61177 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.06 OrthoFinder output from all 47 species
Lfl_g07071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 OrthoFinder output from all 47 species
Ore_g29551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g032380.4.1 Solyc07g032380 Pentatricopeptide repeat-containing protein At5g21222... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 128 186
IPR002885 Pentatricopeptide_repeat 339 398
IPR002885 Pentatricopeptide_repeat 424 453
IPR033443 PPR_long 189 323
IPR002885 Pentatricopeptide_repeat 455 502
No external refs found!