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  5. Dcu_g14494

Dcu_g14494 (ATRABG3C, ATRAB7D, RABG3c)


Aliases : ATRABG3C, ATRAB7D, RABG3c

Description : G-class RAB GTPase & original description: none


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14494
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Als_g34150 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03102 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0307.g063993 AtRABG3d, RABG3d G-class RAB GTPase & original description: CDS=107-727 0.04 OrthoFinder output from all 47 species
LOC_Os05g44050.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Lfl_g08054 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g05620 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37374 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40856 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0287.g027148 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=209-802 0.02 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53072 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!