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  5. Dcu_g14377

Dcu_g14377


Description : not classified & original description: none


Gene families : OG0006136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g14377

Target Alias Description ECC score Gene Family Method Actions
Adi_g015300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11250 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g21683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06837.t1 Aspi01Gene06837 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G079000.1 Ceric.01G079000 not classified & original description: pacid=50590763... 0.03 OrthoFinder output from all 47 species
Ceric.39G057600.1 Ceric.39G057600 not classified & original description: pacid=50582967... 0.03 OrthoFinder output from all 47 species
Len_g08866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022036 No alias not classified & original description: CDS=1-2052 0.02 OrthoFinder output from all 47 species
Spa_g26604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 421 470
IPR002885 Pentatricopeptide_repeat 562 610
IPR002885 Pentatricopeptide_repeat 491 540
IPR002885 Pentatricopeptide_repeat 211 260
IPR002885 Pentatricopeptide_repeat 281 329
IPR002885 Pentatricopeptide_repeat 351 401
IPR002885 Pentatricopeptide_repeat 145 165
No external refs found!