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  5. Dcu_g13516

Dcu_g13516


Description : CENH3-recruitment factor *(KNL2) & original description: none


Gene families : OG0002725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002725_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13516

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene70159.t2 Aspi01Gene70159 CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G056500.1 Ceric.14G056500 CENH3-recruitment factor *(KNL2) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os04g28040.1 LOC_Os04g28040 CENH3-recruitment factor (KNL2/Mis18) 0.03 OrthoFinder output from all 47 species
Len_g22487 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32051 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033849_P002 Zm00001e033849 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015216 SANTA 192 280
No external refs found!