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  5. Dcu_g13404

Dcu_g13404


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13404
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT5G23750 No alias Remorin family protein 0.05 OrthoFinder output from all 47 species
Ala_g14404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20509 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g02159 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g00306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58454.t1 Aspi01Gene58454 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.03 OrthoFinder output from all 47 species
Azfi_s0217.g058560 No alias not classified & original description: CDS=1-231 0.03 OrthoFinder output from all 47 species
Ceric.11G018300.1 Ceric.11G018300 not classified & original description: pacid=50595329... 0.14 OrthoFinder output from all 47 species
Ceric.14G035300.1 Ceric.14G035300 not classified & original description: pacid=50633681... 0.06 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.05 OrthoFinder output from all 47 species
Dac_g12729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
Len_g01012 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g01320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00483 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07447 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.06 OrthoFinder output from all 47 species
Sam_g20100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g035900.1.1 Solyc06g035900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g16772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 41 142
No external refs found!