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  5. Dcu_g13311

Dcu_g13311


Description : component *(uL23m) of large mitoribosomal-subunit proteome & original description: none


Gene families : OG0006048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g13311
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aob_g00432 No alias component *(uL23m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g27060 No alias component *(uL23m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g11751 No alias component *(uL23m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Mp1g23410.1 No alias component mtRPL23 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Pnu_g21281 No alias component *(uL23m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Tin_g22006 No alias component *(uL23m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 29 91
No external refs found!