Dcu_g13182

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none

Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g13182
Cluster	HCCA: Cluster_209

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os09g37050.1	NIP2, LOC_Os09g37050	NEP1-interacting protein 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_119038g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025140	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.04	OrthoFinder output from all 47 species
Sam_g19018	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Spa_g09669	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Tin_g03831	No alias	RING-H2-class ATL-subclass E3 ubiquiTin ligase &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	220	262

External Links

No external refs found!