Dcu_g13139

Description : plant-specific E3 ubiquitin ligase *(RSL/RFA) & original description: none

Gene families : OG0000695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g13139

Target	Alias	Description	ECC score	Gene Family Method
Adi_g114646	No alias	plant-specific E3 ubiquitin ligase *(RSL/RFA) & original...	0.03	OrthoFinder output from all 47 species
Cre01.g060712	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dac_g11683	No alias	plant-specific E3 ubiquitin ligase *(RSL/RFA) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g20802	No alias	plant-specific E3 ubiquitin ligase *(RSL/RFA) & original...	0.04	OrthoFinder output from all 47 species
Mp5g21180.1	No alias	plant-specific E3 ubiquitin ligase (RSL/RFA)	0.03	OrthoFinder output from all 47 species
Pir_g53337	No alias	plant-specific E3 ubiquitin ligase *(RSL/RFA) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e023931_P002	Zm00001e023931	plant-specific E3 ubiquitin ligase (RSL/RFA)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	566	590
IPR002156	RNaseH_domain	149	264
IPR002867	IBR_dom	363	429
IPR002867	IBR_dom	449	498

External Links

No external refs found!