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  5. Dcu_g12728

Dcu_g12728 (ATTIF3A1, ATEIF3A-1,...)


Aliases : ATTIF3A1, ATEIF3A-1, EIF3A-1, TIF3A1, EIF3A

Description : component *(eIF3a) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0003482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12728

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00041460 ATTIF3A1,... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
AT4G11420 ATTIF3A1,... eukaryotic translation initiation factor 3A 0.03 OrthoFinder output from all 47 species
Adi_g005236 ATTIF3A1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019096 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Adi_g058173 ATTIF3A1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g04148 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Aev_g29215 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Als_g02586 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Aob_g17064 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.37 ATTIF3A1,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre13.g564250 ATTIF3A1,... Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Dde_g05941 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g12129 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01031192001 ATTIF3A1,... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Gb_34868 ATTIF3A1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g03070.1 ATTIF3A1,... component eIF3a of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Len_g14269 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Lfl_g38241 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
MA_5693g0010 ATTIF3A1,... component eIF3a of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
MA_8532241g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g02610.1 ATTIF3A1,... component eIF3a of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Ore_g25531 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Sam_g26407 No alias component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Smo142045 ATTIF3A1,... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Solyc09g010460.3.1 ATTIF3A1,... component eIF3a of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Solyc10g084670.3.1 ATTIF3A1,... component eIF3a of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Spa_g08762 ATTIF3A1,... component *(eIF3a) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e016603_P001 ATTIF3A1,... component eIF3a of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 372 508
No external refs found!