Dcu_g12457 (MRP10, ATMRP10, ABCC14)

Aliases : MRP10, ATMRP10, ABCC14

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g12457
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000158.83	ABCC1, ATABCC1,...	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000158.84	ABCC1, ATABCC1,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
LOC_Os06g06440.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
MA_6599298g0010	MRP10, ATMRP10, ABCC14	ABC transporter C family member 14 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g20414	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c21_19700V3.1	ATABCC5, MRP5,...	multidrug resistance-associated protein 5	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-2715	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	654	787
IPR011527	ABC1_TM_dom	958	1198
IPR011527	ABC1_TM_dom	325	588
IPR003439	ABC_transporter-like_ATP-bd	1287	1435

External Links

No external refs found!