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  5. Dcu_g11516

Dcu_g11516


Description : not classified & original description: none


Gene families : OG0004116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g11516

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00098480 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G17900 No alias microfibrillar-associated protein-related 0.02 OrthoFinder output from all 47 species
Adi_g060856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G063600.1 Ceric.34G063600 not classified & original description: pacid=50623043... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020539.41 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os02g17870.1 LOC_Os02g17870 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g22850.2 LOC_Os06g22850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g23320.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g10581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100500.3.1 Solyc01g100500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024108_P001 Zm00001e024108 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR009730 MFAP1_C 171 387
No external refs found!