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  5. Dcu_g11065

Dcu_g11065


Description : not classified & original description: none


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g11065
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.02 OrthoFinder output from all 47 species
AT4G33820 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33840 No alias Glycosyl hydrolase family 10 protein 0.03 OrthoFinder output from all 47 species
Als_g10327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01037832001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.07 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.05 OrthoFinder output from all 47 species
LOC_Os03g47010.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os10g21110.1 LOC_Os10g21110 no description available(sp|q680b7|xyn4_arath : 358.0) 0.03 OrthoFinder output from all 47 species
Len_g07345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10632 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo420481 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g106990.2.1 Solyc01g106990 no description available(sp|q84wt5|xyn5l_arath : 338.0) 0.02 OrthoFinder output from all 47 species
Solyc05g051260.3.1 Solyc05g051260 no description available(sp|q84wt5|xyn5l_arath : 344.0) 0.02 OrthoFinder output from all 47 species
Solyc10g055370.2.1 Solyc10g055370 no description available(sp|a0a1p8b8f8|xyn5_arath : 301.0) 0.02 OrthoFinder output from all 47 species
Tin_g01223 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000757_P001 Zm00001e000757 no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.03 OrthoFinder output from all 47 species
Zm00001e002760_P001 Zm00001e002760 no description available(sp|q680b7|xyn4_arath : 360.0) 0.02 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Zm00001e038773_P006 Zm00001e038773 no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001000 GH10_dom 252 512
IPR003305 CenC_carb-bd 63 190
No external refs found!