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  5. Dcu_g10843

Dcu_g10843 (RNEE/G)


Aliases : RNEE/G

Description : endoribonuclease *(RNase E) & original description: none


Gene families : OG0005953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005953_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10843

Target Alias Description ECC score Gene Family Method Actions
Aev_g13689 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15862 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G007300.1 RNEE/G, Ceric.10G007300 endoribonuclease *(RNase E) & original description:... 0.05 OrthoFinder output from all 47 species
GSVIVT01030124001 RNEE/G RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Len_g30159 RNEE/G endoribonuclease *(RNase E) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09747 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17965 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19266 RNEE/G endoribonuclease *(RNase E) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
InterPro domains Description Start Stop
IPR019307 RNA-bd_AU-1/RNase_E/G 970 1248
IPR002044 CBM_fam20 447 539
No external refs found!