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  5. Dcu_g10841

Dcu_g10841


Description : not classified & original description: none


Gene families : OG0005770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005770_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10841
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00260810 evm_27.TU.AmTr_v1... DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AT3G11960 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.07 OrthoFinder output from all 47 species
Aev_g13991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11695.t1 Aspi01Gene11695 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11696.t1 Aspi01Gene11696 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G065800.1 Ceric.37G065800 not classified & original description: pacid=50615955... 0.06 OrthoFinder output from all 47 species
Dac_g20541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033428001 No alias Spliceosome-associated protein 130 A OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os07g10390.1 LOC_Os07g10390 DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432916g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_129261g0030 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_20031g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g54612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033071_P001 Zm00001e033071 DNA damage-binding protein 1a OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR018846 Cleavage/polyA-sp_fac_asu_N 100 687
IPR004871 Cleavage/polyA-sp_fac_asu_C 999 1385
No external refs found!