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  5. Dcu_g10796

Dcu_g10796


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0004780 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10796

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00167590 evm_27.TU.AmTr_v1... Thioredoxin-like fold domain-containing protein MRL7,... 0.03 OrthoFinder output from all 47 species
AT4G28590 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Cba_g17005 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Ceric.31G033000.1 Ceric.31G033000 regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01038258001 No alias Thioredoxin-like fold domain-containing protein MRL7L,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g61320.1 LOC_Os01g61320 Thioredoxin-like fold domain-containing protein MRL7... 0.03 OrthoFinder output from all 47 species
LOC_Os05g34470.1 LOC_Os05g34470 Thioredoxin-like fold domain-containing protein MRL7L... 0.04 OrthoFinder output from all 47 species
Nbi_g08045 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016907 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Smo404435 No alias Thioredoxin-like fold domain-containing protein MRL7L,... 0.02 OrthoFinder output from all 47 species
Solyc04g071420.3.1 Solyc04g071420 Thioredoxin-like fold domain-containing protein MRL7L,... 0.03 OrthoFinder output from all 47 species
Tin_g13854 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Zm00001e019402_P001 Zm00001e019402 Thioredoxin-like fold domain-containing protein MRL7... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!