Dcu_g10796


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0004780 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004780_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10796

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00167590 evm_27.TU.AmTr_v1... Thioredoxin-like fold domain-containing protein MRL7,... 0.03 OrthoFinder output from all 47 species
AT4G28590 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Cba_g17005 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Ceric.31G033000.1 Ceric.31G033000 regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01038258001 No alias Thioredoxin-like fold domain-containing protein MRL7L,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g61320.1 LOC_Os01g61320 Thioredoxin-like fold domain-containing protein MRL7... 0.03 OrthoFinder output from all 47 species
LOC_Os05g34470.1 LOC_Os05g34470 Thioredoxin-like fold domain-containing protein MRL7L... 0.04 OrthoFinder output from all 47 species
Nbi_g08045 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016907 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Smo404435 No alias Thioredoxin-like fold domain-containing protein MRL7L,... 0.02 OrthoFinder output from all 47 species
Solyc04g071420.3.1 Solyc04g071420 Thioredoxin-like fold domain-containing protein MRL7L,... 0.03 OrthoFinder output from all 47 species
Tin_g13854 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Zm00001e019402_P001 Zm00001e019402 Thioredoxin-like fold domain-containing protein MRL7... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!